LOCUS Exported 3471 bp ds-DNA circular SYN 24-6-2015
DEFINITION Flexi(R) vector with an ampicillin resistance marker, for bacterial
or in vitro expression of a protein with an N-terminal HQ metal
affinity tag.
ACCESSION DQ132629
VERSION .
KEYWORDS pFN6A (HQ)
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3471)
AUTHORS .
TITLE Direct Submission
COMMENT Subclone a coding sequence between the SgfI/AsiSI and PmeI sites to
remove the lethal barnase gene.
FEATURES Location/Qualifiers
source 1..3471
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
promoter 21..39
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 70..72
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 76..93
/codon_start=1
/product="HQHQHQ metal affinity tag"
/note="HQ tag"
/note="The HQ tag binds to nickel and other metal ions much
like the 6xHis tag, but may allow elution at lower
concentrations of imidazole (Godat et al., 2008)."
/translation="HQHQHQ"
CDS 125..460
/codon_start=1
/product="ribonuclease from Bacillus amyloliquefaciens"
/note="barnase"
/note="The barnase gene is lethal in standard bacterial
transformation strains."
/protein_id="
"
/translation="MAQVINTFDGVADYLQTYHKLPDNYITKSEAQALGWVASKGNLAD
VAPGKSIGGDIFSNREGKLPGKSGRTWREADINYTSGFRNSDRILYSSDWLIYKTTDHY
QTFTKIR"
terminator 589..636
/note="T7 terminator"
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
promoter 865..969
/gene="bla"
/note="AmpR promoter"
CDS 970..1830
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin complement(1988..2576)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2692..2975
/note="cer region"
/note="ColE1-derived recombination site that helps to
maintain plasmids as monomers"
terminator 3205..3291
/gene="Escherichia coli rrnB"
/note="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 3383..3410
/note="rrnB T2 terminator"
/note="transcription terminator T2 from the E. coli rrnB
gene"
LOCUS Exported 3471 bp ds-DNA circular SYN 24-6-2015
DEFINITION Flexi(R) vector with an ampicillin resistance marker, for bacterial
or in vitro expression of a protein with an N-terminal HQ metal
affinity tag.
ACCESSION DQ132629
VERSION .
KEYWORDS pFN6A (HQ)
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3471)
AUTHORS .
TITLE Direct Submission
COMMENT Subclone a coding sequence between the SgfI/AsiSI and PmeI sites to
remove the lethal barnase gene.
FEATURES Location/Qualifiers
source 1..3471
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
promoter 21..39
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 70..72
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 76..93
/codon_start=1
/product="HQHQHQ metal affinity tag"
/note="HQ tag"
/note="The HQ tag binds to nickel and other metal ions much
like the 6xHis tag, but may allow elution at lower
concentrations of imidazole (Godat et al., 2008)."
/translation="HQHQHQ"
CDS 125..460
/codon_start=1
/product="ribonuclease from Bacillus amyloliquefaciens"
/note="barnase"
/note="The barnase gene is lethal in standard bacterial
transformation strains."
/protein_id="
"
/translation="MAQVINTFDGVADYLQTYHKLPDNYITKSEAQALGWVASKGNLAD
VAPGKSIGGDIFSNREGKLPGKSGRTWREADINYTSGFRNSDRILYSSDWLIYKTTDHY
QTFTKIR"
terminator 589..636
/note="T7 terminator"
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
promoter 865..969
/gene="bla"
/note="AmpR promoter"
CDS 970..1830
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin complement(1988..2576)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2692..2975
/note="cer region"
/note="ColE1-derived recombination site that helps to
maintain plasmids as monomers"
terminator 3205..3291
/gene="Escherichia coli rrnB"
/note="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 3383..3410
/note="rrnB T2 terminator"
/note="transcription terminator T2 from the E. coli rrnB
gene"