LOCUS Exported 6128 bp ds-DNA circular SYN 13-MAY-2021
DEFINITION tRNA synthetase/tRNA pair for the in vivo incorporation of a
photocrosslinker, p-benzoyl-l-phenylalanine into proteins in E coli
in response to the amber codon, TAG. .
ACCESSION .
VERSION .
KEYWORDS pEVOL-pBpF
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6128)
AUTHORS Chin JW, Martin AB, King DS, Wang L, Schultz PG
TITLE Addition of a photocrosslinking amino acid to the genetic code of
Escherichiacoli.
JOURNAL Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11020-4. Epub 2002 Aug
1.
PUBMED 12154230
REFERENCE 2 (bases 1 to 6128)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Proc Natl
Acad Sci U S A."; date: "2002-08-20"; volume: "99(17)"; pages:
"11020-4. Epub 2002 Aug 1"
FEATURES Location/Qualifiers
source 1..6128
/organism="synthetic DNA construct"
/mol_type="other DNA"
promoter 22..306
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
primer_bind 229..248
/label=pBAD Forward
/note="For vectors with E. coli araBAD promoter, forward
primer"
CDS 1273..1290
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
primer_bind complement(1346..1363)
/label=pBAD Reverse
/note="For vectors with E. coli araBAD promoter, reverse
primer"
CDS complement(3266..3925)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
primer_bind 3840..3859
/label=CAT-R
/note="Chloramphenicol resistance gene, reverse primer"
promoter complement(3926..4028)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
primer_bind complement(4420..4437)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(4554..5099)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin.
"
primer_bind complement(4634..4653)
/label=pBR322ori-F
/note="pBR322 origin, forward primer"
CDS complement(5245..6123)
/codon_start=1
/gene="araC"
/product="L-arabinose regulatory protein"
/label=araC
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPSDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"
LOCUS Exported 6128 bp ds-DNA circular SYN 13-MAY-2021
DEFINITION tRNA synthetase/tRNA pair for the in vivo incorporation of a
photocrosslinker, p-benzoyl-l-phenylalanine into proteins in E coli
in response to the amber codon, TAG. .
ACCESSION .
VERSION .
KEYWORDS pEVOL-pBpF
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6128)
AUTHORS Chin JW, Martin AB, King DS, Wang L, Schultz PG
TITLE Addition of a photocrosslinking amino acid to the genetic code of
Escherichiacoli.
JOURNAL Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11020-4. Epub 2002 Aug
1.
PUBMED 12154230
REFERENCE 2 (bases 1 to 6128)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Proc Natl
Acad Sci U S A."; date: "2002-08-20"; volume: "99(17)"; pages:
"11020-4. Epub 2002 Aug 1"
FEATURES Location/Qualifiers
source 1..6128
/organism="synthetic DNA construct"
/mol_type="other DNA"
promoter 22..306
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
primer_bind 229..248
/label=pBAD Forward
/note="For vectors with E. coli araBAD promoter, forward
primer"
CDS 1273..1290
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
primer_bind complement(1346..1363)
/label=pBAD Reverse
/note="For vectors with E. coli araBAD promoter, reverse
primer"
CDS complement(3266..3925)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
primer_bind 3840..3859
/label=CAT-R
/note="Chloramphenicol resistance gene, reverse primer"
promoter complement(3926..4028)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
primer_bind complement(4420..4437)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(4554..5099)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin.
"
primer_bind complement(4634..4653)
/label=pBR322ori-F
/note="pBR322 origin, forward primer"
CDS complement(5245..6123)
/codon_start=1
/gene="araC"
/product="L-arabinose regulatory protein"
/label=araC
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPSDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"